Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWWV01010282.1 Corchorus capsularis cultivar CVL-1 contig10303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 23455
ACGTcount: A:0.32, C:0.20, G:0.18, T:0.29
Found at i:87 original size:32 final size:32
Alignment explanation
Indices: 51--130 Score: 90
Period size: 32 Copynumber: 2.5 Consensus size: 32
41 GACGCAATCG
* *
51 GCAAATGGCGATGCCAAGGCAACCGACCATCA
1 GCAAATGACGACGCCAAGGCAACCGACCATCA
* ** *
83 GCAAATGACGACGCCAAGGCCATGGACCATCG
1 GCAAATGACGACGCCAAGGCAACCGACCATCA
115 GCAAAT-ACCGACGCCA
1 GCAAATGA-CGACGCCA
131 CATCAGGACT
Statistics
Matches: 41, Mismatches: 6, Indels: 2
0.84 0.12 0.04
Matches are distributed among these distances:
31 1 0.02
32 40 0.98
ACGTcount: A:0.34, C:0.33, G:0.25, T:0.09
Consensus pattern (32 bp):
GCAAATGACGACGCCAAGGCAACCGACCATCA
Found at i:296 original size:22 final size:21
Alignment explanation
Indices: 264--342 Score: 70
Period size: 22 Copynumber: 3.7 Consensus size: 21
254 ACCCATGTTA
*
264 GGGCCCAAAGGTGCCCCCGAG
1 GGGCCCCAAGGTGCCCCCGAG
*
285 GAGGCCCCAAGGCGCCCCCGAG
1 G-GGCCCCAAGGTGCCCCCGAG
* * *
307 GTTGCCCCAA-GTGGCCCCAAG
1 G-GGCCCCAAGGTGCCCCCGAG
*
328 GCGCCACCAAGGTGC
1 GGGCC-CCAAGGTGC
343 GAGGTACATG
Statistics
Matches: 46, Mismatches: 9, Indels: 5
0.77 0.15 0.08
Matches are distributed among these distances:
20 3 0.07
21 14 0.30
22 29 0.63
ACGTcount: A:0.19, C:0.41, G:0.34, T:0.06
Consensus pattern (21 bp):
GGGCCCCAAGGTGCCCCCGAG
Found at i:1029 original size:19 final size:19
Alignment explanation
Indices: 1002--1041 Score: 71
Period size: 19 Copynumber: 2.1 Consensus size: 19
992 GCCAACATGA
*
1002 CAAGGGACGTCATCAAATT
1 CAAGAGACGTCATCAAATT
1021 CAAGAGACGTCATCAAATT
1 CAAGAGACGTCATCAAATT
1040 CA
1 CA
1042 GACAAGGCCC
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
19 20 1.00
ACGTcount: A:0.40, C:0.23, G:0.17, T:0.20
Consensus pattern (19 bp):
CAAGAGACGTCATCAAATT
Found at i:1092 original size:25 final size:25
Alignment explanation
Indices: 1057--1139 Score: 76
Period size: 25 Copynumber: 3.2 Consensus size: 25
1047 GGCCCCCATG
1057 GGCCATCGGCAAATGCCGACGCCAA
1 GGCCATCGGCAAATGCCGACGCCAA
* *** ** *
1082 GGCCATGGGCATCCGCAAATGCCGCAA
1 GGCCATCGGCAAATGCCGACG-C-CAA
*
1109 GGCCATCGGTAAATGCCGACGCCAA
1 GGCCATCGGCAAATGCCGACGCCAA
1134 GGCCAT
1 GGCCAT
1140 GGGCCATCGG
Statistics
Matches: 41, Mismatches: 15, Indels: 4
0.68 0.25 0.07
Matches are distributed among these distances:
25 23 0.56
26 2 0.05
27 16 0.39
ACGTcount: A:0.27, C:0.34, G:0.29, T:0.11
Consensus pattern (25 bp):
GGCCATCGGCAAATGCCGACGCCAA
Found at i:1135 original size:52 final size:53
Alignment explanation
Indices: 1057--1158 Score: 179
Period size: 52 Copynumber: 1.9 Consensus size: 53
1047 GGCCCCCATG
1057 GGCCATCGGCAAATGCCGACGCCAAGGCCATGGG-CATCCGCAAATGCCGCAA
1 GGCCATCGGCAAATGCCGACGCCAAGGCCATGGGCCATCCGCAAATGCCGCAA
* *
1109 GGCCATCGGTAAATGCCGACGCCAAGGCCATGGGCCATCGGCAAATGCCG
1 GGCCATCGGCAAATGCCGACGCCAAGGCCATGGGCCATCCGCAAATGCCG
1159 GCACCACATC
Statistics
Matches: 47, Mismatches: 2, Indels: 1
0.94 0.04 0.02
Matches are distributed among these distances:
52 33 0.70
53 14 0.30
ACGTcount: A:0.25, C:0.33, G:0.30, T:0.11
Consensus pattern (53 bp):
GGCCATCGGCAAATGCCGACGCCAAGGCCATGGGCCATCCGCAAATGCCGCAA
Found at i:1891 original size:31 final size:32
Alignment explanation
Indices: 1744--2352 Score: 602
Period size: 32 Copynumber: 19.2 Consensus size: 32
1734 CACGTCGGCA
* *
1744 CCAAGGGACATCGGCAAATGCCGACGACAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
1776 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
*
1808 CCAAGGGTCATCGGCAAATGCCGACGCCAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
*
1840 CCATGGGCCATCGGCAAATGCCGACGCCAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
* *
1872 CCATGGG-CATCCGCAAATGCCGACGCCAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
* * * * * * **
1903 CCAAGGGGACA-AGGGACAT--C-A-TCAAATT
1 CCAA-GGGCCATCGGCAAATGCCGACGCCAAGG
* * * **
1931 CCAA-CGCAATCGGTAAATGCCGATACCAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
*
1962 -CAACGGGCCATCGGCAAATGCCGACGCCTAGG
1 CCAA-GGGCCATCGGCAAATGCCGACGCCAAGG
*
1994 CCATGGG-CATCGGCAAATGCCGACGCCAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
* *
2025 CCAAGGGCCATCGGCAAATGCCAACGCCAAAG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
* * *
2057 CCATGGGCCATCGGCAAATGCCG-TGCCATGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
* *
2088 CCATGGG-CATCGGTAAATGCCGATGCCAAGGCCAAGG
1 CCAAGGGCCATCGGCAAATGCCGA---C---GCCAAGG
* *
2125 CCAAGGG-CATCGGCAAAAGCCGATGCCAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
* *
2156 CCAAGGGCCATCGGCAAAATGCCCACACCAAGG
1 CCAAGGGCCATCGGC-AAATGCCGACGCCAAGG
* * * *
2189 CCATGGG-CATCGTCAAATGCTGACGCCAAGA
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
*
2220 CCAAGGGCCATCGGCAAATGCCGACGTCAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
* * * **
2252 ACATGGG-CATCGGCAACTATCGACGCCAAGG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
2283 CCAAGGG-CAT-GGACAAATGCCGACGCCAAGG
1 CCAAGGGCCATCGG-CAAATGCCGACGCCAAGG
* * * *
2314 CCTAGGGCCATCGACAAATGCCGATGCCAATG
1 CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
2346 CCAAGGG
1 CCAAGGG
2353 GACAAGGGAC
Statistics
Matches: 474, Mismatches: 79, Indels: 48
0.79 0.13 0.08
Matches are distributed among these distances:
26 2 0.00
27 5 0.01
28 7 0.01
29 2 0.00
30 21 0.04
31 152 0.32
32 235 0.50
33 24 0.05
37 26 0.05
ACGTcount: A:0.29, C:0.31, G:0.29, T:0.10
Consensus pattern (32 bp):
CCAAGGGCCATCGGCAAATGCCGACGCCAAGG
Found at i:2160 original size:37 final size:37
Alignment explanation
Indices: 2081--2161 Score: 126
Period size: 37 Copynumber: 2.2 Consensus size: 37
2071 CAAATGCCGT
* * * *
2081 GCCATGGCCATGGGCATCGGTAAATGCCGATGCCAAG
1 GCCAAGGCCAAGGGCATCGGCAAAAGCCGATGCCAAG
2118 GCCAAGGCCAAGGGCATCGGCAAAAGCCGATGCCAAG
1 GCCAAGGCCAAGGGCATCGGCAAAAGCCGATGCCAAG
2155 GCCAAGG
1 GCCAAGG
2162 GCCATCGGCA
Statistics
Matches: 40, Mismatches: 4, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
37 40 1.00
ACGTcount: A:0.28, C:0.28, G:0.33, T:0.10
Consensus pattern (37 bp):
GCCAAGGCCAAGGGCATCGGCAAAAGCCGATGCCAAG
Found at i:2501 original size:31 final size:31
Alignment explanation
Indices: 2382--2520 Score: 134
Period size: 32 Copynumber: 4.4 Consensus size: 31
2372 TTTCGACGCA
* * * * *
2382 ATCGGCAAATGGCGATGCCAAGGCAACGGACC
1 ATCGGCAAATGCCGACGCCAAGGCCATGG-GC
* * *
2414 ATCAGCAAATGACGACGCCAAGGCCATGGACC
1 ATCGGCAAATGCCGACGCCAAGGCCATGG-GC
* *
2446 ATCGGCCAATACCGACGCCAAGGCCATGGGC
1 ATCGGCAAATGCCGACGCCAAGGCCATGGGC
* **
2477 ATTGGCAAATGCCGATTCCAAGGCCATGGGCC
1 ATCGGCAAATGCCGACGCCAAGGCCATGGG-C
2509 ATCGGCAAATGC
1 ATCGGCAAATGC
2521 TGATGCCAGT
Statistics
Matches: 90, Mismatches: 16, Indels: 2
0.83 0.15 0.02
Matches are distributed among these distances:
31 26 0.29
32 64 0.71
ACGTcount: A:0.29, C:0.30, G:0.28, T:0.12
Consensus pattern (31 bp):
ATCGGCAAATGCCGACGCCAAGGCCATGGGC
Found at i:2591 original size:186 final size:184
Alignment explanation
Indices: 2226--2625 Score: 502
Period size: 186 Copynumber: 2.2 Consensus size: 184
2216 AAGACCAAGG
* * * *
2226 GCCATCGGCAAATGCCGACGTCAAGGACATGGGCATCGGCAACTATCGACGCCAAGGCCAAGGGC
1 GCCATC-GCAAATGCCGACGCCAAGGCCATGGCCATCGGCAACTACCGACGCCAAGGCCAAGGGC
2291 ATGGACAAATGCCGACGCCAAGGCCTAGGGCCATCGACAAATGCCGATGCCAATGCCAAGGGGAC
65 ATGGACAAATGCCGACGCCAAGGCCTAGGGCCATCGACAAATGCCGATGCCAATGCCAAGGGGAC
* * * **
2356 AAGGGACATCATAAAATTTCGACGCAATCGGCAAATGGCGATGCCAAGGCAACG-
130 AAGGGACATCATAAAATTCCGACGCAATCAGCAAATGCCGACACCAAGGCAACGT
* *
2410 GACCATCAGCAAATGACGACGCCAAGGCCATGGACCATCGGCCAA-TACCGACGCCAAGGCCATG
1 G-CCATC-GCAAATGCCGACGCCAAGGCCATGG-CCATCGG-CAACTACCGACGCCAAGGCCAAG
** * * *
2474 GGCATTGG-CAAATGCCGATTCCAAGGCC-ATGGGCCATCGGCAAATGCTGATGCCAGTGCCAAG
62 GGCA-TGGACAAATGCCGACGCCAAGGCCTA-GGGCCATCGACAAATGCCGATGCCAATGCCAAG
* * * *
2537 TGGACAAGGGACATCATCAAATTCCGACGCAATCAGCCAATGCCGACACCAAGGCCACGT
125 GGGACAAGGGACATCATAAAATTCCGACGCAATCAGCAAATGCCGACACCAAGGCAACGT
* *
2597 GCCATCGTCAAATGCCGATGCCAATGCCA
1 GCCATCG-CAAATGCCGACGCCAAGGCCA
2626 ACGTCACAAG
Statistics
Matches: 185, Mismatches: 24, Indels: 12
0.84 0.11 0.05
Matches are distributed among these distances:
184 1 0.01
185 29 0.16
186 148 0.80
187 7 0.04
ACGTcount: A:0.30, C:0.30, G:0.27, T:0.13
Consensus pattern (184 bp):
GCCATCGCAAATGCCGACGCCAAGGCCATGGCCATCGGCAACTACCGACGCCAAGGCCAAGGGCA
TGGACAAATGCCGACGCCAAGGCCTAGGGCCATCGACAAATGCCGATGCCAATGCCAAGGGGACA
AGGGACATCATAAAATTCCGACGCAATCAGCAAATGCCGACACCAAGGCAACGT
Found at i:2626 original size:91 final size:91
Alignment explanation
Indices: 2484--2655 Score: 256
Period size: 91 Copynumber: 1.9 Consensus size: 91
2474 GGCATTGGCA
** * * * *
2484 AATGCCGATTCCAAGGCCATGGGCCATCGGCAAATGCTGATGCCAGTGCCAA-GTGGACAAGGGA
1 AATGCCGACACCAAGGCCACGGGCCATCGGCAAATGCCGATGCCAATGCCAACGT-CACAAGGGA
2548 CATCATCAAATTCCGACGCAATCAGCC
65 CATCATCAAATTCCGACGCAATCAGCC
* *
2575 AATGCCGACACCAAGGCCACGTGCCATCGTCAAATGCCGATGCCAATGCCAACGTCACAAGGGAC
1 AATGCCGACACCAAGGCCACGGGCCATCGGCAAATGCCGATGCCAATGCCAACGTCACAAGGGAC
2640 ATCATCAAATTCCGAC
66 ATCATCAAATTCCGAC
2656 AAGGCCATCG
Statistics
Matches: 72, Mismatches: 8, Indels: 2
0.88 0.10 0.02
Matches are distributed among these distances:
91 70 0.97
92 2 0.03
ACGTcount: A:0.31, C:0.31, G:0.23, T:0.16
Consensus pattern (91 bp):
AATGCCGACACCAAGGCCACGGGCCATCGGCAAATGCCGATGCCAATGCCAACGTCACAAGGGAC
ATCATCAAATTCCGACGCAATCAGCC
Found at i:2699 original size:31 final size:30
Alignment explanation
Indices: 2661--2763 Score: 134
Period size: 31 Copynumber: 3.3 Consensus size: 30
2651 CCGACAAGGC
**
2661 CATCGGCAAATGTTGACGCCAAGGCCATGG
1 CATCGGCAAATGCCGACGCCAAGGCCATGG
* *
2691 ACATCGGCAAATGCCAACGCCAAGGCCAAGGG
1 -CATCGGCAAATGCCGACGCCAAGGCC-ATGG
*
2723 CATCGGCAAATGCCGACGCAAAGGCCATTGG
1 CATCGGCAAATGCCGACGCCAAGGCCA-TGG
2754 CATCGGCAAA
1 CATCGGCAAA
2764 AGACGATGCC
Statistics
Matches: 63, Mismatches: 7, Indels: 4
0.85 0.09 0.05
Matches are distributed among these distances:
30 1 0.02
31 59 0.94
32 3 0.05
ACGTcount: A:0.31, C:0.29, G:0.28, T:0.12
Consensus pattern (30 bp):
CATCGGCAAATGCCGACGCCAAGGCCATGG
Found at i:2883 original size:246 final size:247
Alignment explanation
Indices: 2412--2952 Score: 807
Period size: 246 Copynumber: 2.2 Consensus size: 247
2402 AGGCAACGGA
* * * * *
2412 CCATCAGCAAATGACGACGCCAAGGCCATGGACCATCGGCCAATACCGACGCCAAGGCCATGGGC
1 CCATCGGCAAATGACGACGCCAAGGCCATGGA-CATCGGCAAATGCCAACGCCAAGGCCAAGGGC
* ** * *
2477 ATTGGCAAATGCCGATTCCAAGGCCATGGGCCATCGGCAAATGCTGATGCCAGTGCCAAGTGGAC
65 ATCGGCAAATGCCGACGCAAAGGCCATGGGCCATCGGCAAAAGCTGATGCCAGTGCCAAGTGGAC
* * *
2542 AAGGGACATCATCAAATTCCGACGCAATCAGCCAATGCCGACACCAAGGCCACGTGCCATCGTCA
130 AAGGGACATCATCAAATTCCAACGCAATCAGCAAATGCCGACACCAAGGCCACGTGCCATCGGCA
*
2607 AATGCCGATGCCAATGCCAACGTCACAAGGGACATCATCAAATTCCGACAAGG
195 AATGCCGATGCCAATGCCAACGTCACAAGGGACATCATAAAATTCCGACAAGG
**
2660 CCATCGGCAAATGTTGACGCCAAGGCCATGGACATCGGCAAATGCCAACGCCAAGGCCAAGGGCA
1 CCATCGGCAAATGACGACGCCAAGGCCATGGACATCGGCAAATGCCAACGCCAAGGCCAAGGGCA
* *
2725 TCGGCAAATGCCGACGCAAAGGCCATTGG-CATCGGCAAAAGAC-GATGCCAGTGCCAATTGGAC
66 TCGGCAAATGCCGACGCAAAGGCCATGGGCCATCGGCAAAAG-CTGATGCCAGTGCCAAGTGGAC
* * * *
2788 AAGGGACATCATCAAATTCCAACGCAATCGGCAAATGCCGACGCCAAGGCTATGTGCCATCGGCA
130 AAGGGACATCATCAAATTCCAACGCAATCAGCAAATGCCGACACCAAGGCCACGTGCCATCGGCA
*
2853 AATGCCGATGCCAATGCCAACGTGACAAGGGACATCATAAAATTCCGACAAGG
195 AATGCCGATGCCAATGCCAACGTCACAAGGGACATCATAAAATTCCGACAAGG
* * *
2906 CCATCGGTAAATGCCGACGCCAAGGCCATGGGCCATCGGCAAATGCC
1 CCATCGGCAAATGACGACGCCAAGGCCAT-GGACATCGGCAAATGCC
2953 GGCACCACAT
Statistics
Matches: 264, Mismatches: 27, Indels: 5
0.89 0.09 0.02
Matches are distributed among these distances:
246 165 0.62
247 70 0.27
248 29 0.11
ACGTcount: A:0.31, C:0.30, G:0.25, T:0.14
Consensus pattern (247 bp):
CCATCGGCAAATGACGACGCCAAGGCCATGGACATCGGCAAATGCCAACGCCAAGGCCAAGGGCA
TCGGCAAATGCCGACGCAAAGGCCATGGGCCATCGGCAAAAGCTGATGCCAGTGCCAAGTGGACA
AGGGACATCATCAAATTCCAACGCAATCAGCAAATGCCGACACCAAGGCCACGTGCCATCGGCAA
ATGCCGATGCCAATGCCAACGTCACAAGGGACATCATAAAATTCCGACAAGG
Found at i:2949 original size:94 final size:91
Alignment explanation
Indices: 2716--2953 Score: 309
Period size: 94 Copynumber: 2.6 Consensus size: 91
2706 AACGCCAAGG
* * * * * *
2716 CCAAGGGCATCGGCAAATGCCGACGCAAAGGCCATTGG-CATCGGCAAAAGACGATGCCAGTGCC
1 CCAAGGCCATCGGCAAATGCCGACGCCAAGGCCATGGGCCATCGGCAAATGCCGATGCCAATGCC
* *
2780 AATTGGACAAGGGACATCATCAAATT
66 AAGTGGACAAGGGACATCATAAAATT
* * * *
2806 CCAACGCAATCGGCAAATGCCGACGCCAAGGCTATGTGCCATCGGCAAATGCCGATGCCAATGCC
1 CCAAGGCCATCGGCAAATGCCGACGCCAAGGCCATGGGCCATCGGCAAATGCCGATGCCAATGCC
2871 AACGT-GACAAGGGACATCATAAAATT
66 AA-GTGGACAAGGGACATCATAAAATT
*
2897 CCGACAAGGCCATCGGTAAATGCCGACGCCAAGGCCATGGGCCATCGGCAAATGCCG
1 -C--CAAGGCCATCGGCAAATGCCGACGCCAAGGCCATGGGCCATCGGCAAATGCCG
2954 GCACCACATC
Statistics
Matches: 126, Mismatches: 17, Indels: 6
0.85 0.11 0.04
Matches are distributed among these distances:
90 31 0.25
91 45 0.36
92 2 0.02
94 48 0.38
ACGTcount: A:0.32, C:0.29, G:0.26, T:0.14
Consensus pattern (91 bp):
CCAAGGCCATCGGCAAATGCCGACGCCAAGGCCATGGGCCATCGGCAAATGCCGATGCCAATGCC
AAGTGGACAAGGGACATCATAAAATT
Found at i:7992 original size:45 final size:45
Alignment explanation
Indices: 7928--8015 Score: 149
Period size: 45 Copynumber: 2.0 Consensus size: 45
7918 GAAACCTCAC
7928 TACCAACCAATCCGTGATTCCATTGACCATCTCCAAATCTGTAGG
1 TACCAACCAATCCGTGATTCCATTGACCATCTCCAAATCTGTAGG
** *
7973 TACCAACCAATTGGTGATTCCATTGACTATCTCCAAATCTGTA
1 TACCAACCAATCCGTGATTCCATTGACCATCTCCAAATCTGTA
8016 TGATATAAAA
Statistics
Matches: 40, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
45 40 1.00
ACGTcount: A:0.30, C:0.28, G:0.12, T:0.30
Consensus pattern (45 bp):
TACCAACCAATCCGTGATTCCATTGACCATCTCCAAATCTGTAGG
Found at i:10568 original size:43 final size:43
Alignment explanation
Indices: 10503--10588 Score: 145
Period size: 43 Copynumber: 2.0 Consensus size: 43
10493 GGTGCTTCCC
*
10503 CTTTCGCTTTCTGTTCACCTGATTTAATTTATGATGATGAATT
1 CTTTCGCTTTCTGTTCACCTGATTTAATCTATGATGATGAATT
* *
10546 CTTTCGCTTTCTGTTTATCTGATTTAATCTATGATGATGAATT
1 CTTTCGCTTTCTGTTCACCTGATTTAATCTATGATGATGAATT
10589 TCACTACATC
Statistics
Matches: 40, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
43 40 1.00
ACGTcount: A:0.21, C:0.15, G:0.14, T:0.50
Consensus pattern (43 bp):
CTTTCGCTTTCTGTTCACCTGATTTAATCTATGATGATGAATT
Found at i:18187 original size:6 final size:6
Alignment explanation
Indices: 18176--18201 Score: 52
Period size: 6 Copynumber: 4.3 Consensus size: 6
18166 CCAAAGCTTC
18176 CTGGGA CTGGGA CTGGGA CTGGGA CT
1 CTGGGA CTGGGA CTGGGA CTGGGA CT
18202 CTCCATGGTC
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 20 1.00
ACGTcount: A:0.15, C:0.19, G:0.46, T:0.19
Consensus pattern (6 bp):
CTGGGA
Done.