Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010288.1 Corchorus capsularis cultivar CVL-1 contig10309, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23169

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
159--286
31
4.4
29
74
19
99
34
26
21
17
1.96
163--265
53
1.9
53
86
0
143
36
25
19
18
1.94
215--323
31
3.5
31
84
0
128
34
24
22
18
1.96
2867--2925
29
2.0
29
100
0
118
42
20
13
23
1.88
12625--12652
2
14.0
2
100
0
56
50
0
0
50
1.00
21869--23166
328
3.9
328
84
3
1588
35
16
15
33
1.90

Tables:   1

The End!