Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001029.1 Corchorus capsularis cultivar CVL-1 contig01029, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8206

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1106--1286
93
1.9
93
87
0
263
40
12
21
25
1.88
1717--1746
12
2.5
12
94
0
51
43
0
33
23
1.54
3642--3684
2
21.5
2
85
0
59
51
6
0
41
1.29
5419--5480
32
1.9
32
93
0
106
20
22
22
33
1.97
5383--5524
31
4.6
31
80
2
142
18
22
24
34
1.96
7625--8194
30
18.7
30
90
2
843
31
17
18
32
1.94

Tables:   1

The End!