Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010292.1 Corchorus capsularis cultivar CVL-1 contig10313, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72318

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12835--12897
22
2.9
22
85
0
81
34
14
17
33
1.90
13976--14018
6
6.8
6
86
7
59
81
0
2
16
0.79
21137--21185
2
25.0
2
95
4
91
0
48
0
51
1.00
23139--23166
2
14.0
2
100
0
56
50
0
0
50
1.00
57100--57146
24
2.0
24
91
8
78
14
40
8
36
1.77
57223--57263
21
1.9
22
85
5
57
36
14
34
14
1.87
65361--65407
24
2.0
24
91
8
78
14
40
8
36
1.77
65971--66007
18
2.1
18
89
0
56
27
35
5
32
1.79
70880--70934
25
2.2
26
90
3
85
16
20
10
52
1.73

Tables:   1

The End!