Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010294.1 Corchorus capsularis cultivar CVL-1 contig10315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35648

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7472--7549
39
2.0
39
87
5
113
17
12
51
17
1.76
8279--8305
6
4.5
6
100
0
54
14
18
48
18
1.82
20945--20969
2
12.5
2
100
0
50
48
0
0
52
1.00
30123--30155
13
2.4
14
90
5
50
51
3
15
30
1.58
35004--35044
21
2.0
21
85
0
55
36
4
34
24
1.77
35176--35226
24
2.1
24
100
0
102
41
3
31
23
1.73
35186--35239
24
2.2
24
83
6
65
42
9
31
16
1.80
35472--35527
27
2.1
27
89
0
85
25
16
41
17
1.89
35529--35585
30
1.9
30
96
0
105
24
17
45
12
1.83

Tables:   1

The End!