Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010295.1 Corchorus capsularis cultivar CVL-1 contig10316, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8492

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47--100
27
2.0
27
92
0
90
16
40
18
24
1.90
590--727
28
5.1
28
62
22
89
28
15
3
52
1.59
598--689
6
16.3
6
71
13
61
29
15
3
52
1.58
562--627
22
3.0
22
67
8
62
31
15
4
48
1.65
632--745
22
4.9
23
66
18
74
25
15
5
53
1.63
577--735
50
2.9
56
88
11
267
27
16
5
50
1.65
812--898
42
2.1
42
97
0
165
27
25
28
18
1.98

Tables:   1

The End!