Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010296.1 Corchorus capsularis cultivar CVL-1 contig10317, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81418

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7289--7326
19
2.0
19
94
0
67
42
18
10
28
1.83
11257--11391
42
3.0
44
66
28
122
50
7
8
34
1.60
11213--11365
46
3.4
47
68
26
141
55
5
9
28
1.56
11213--11391
89
2.0
89
98
0
349
51
6
9
31
1.60
11564--11589
2
13.0
2
100
0
52
50
0
0
50
1.00
13162--13228
24
2.8
24
88
0
98
19
26
7
46
1.76
15996--16025
14
2.1
14
100
0
60
26
0
20
53
1.46
19452--19588
54
2.5
54
80
9
136
32
12
6
48
1.67
26772--26800
9
3.3
9
90
9
51
31
0
0
68
0.89
26764--26800
17
2.1
18
90
5
58
35
0
0
64
0.94
27686--27723
11
3.5
11
89
10
51
39
0
2
57
1.12
40247--40274
2
14.0
2
100
0
56
50
0
0
50
1.00
44271--44311
14
2.7
15
85
11
57
51
0
0
48
1.00
68363--68400
20
1.9
20
100
0
76
63
10
5
21
1.46
71013--71040
2
14.0
2
100
0
56
50
0
0
50
1.00
81383--81418
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!