Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010301.1 Corchorus capsularis cultivar CVL-1 contig10322, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41255

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7768--7813
13
3.4
13
77
11
56
17
0
15
67
1.24
7809--7874
32
2.1
32
100
0
132
30
12
9
48
1.71
12494--12542
24
2.0
25
92
4
82
16
20
14
48
1.80
12751--12781
2
15.5
2
100
0
62
51
0
0
48
1.00
19102--19152
20
2.6
19
84
6
66
1
1
9
86
0.73
19102--19151
26
1.9
26
95
0
91
2
2
8
88
0.68
23028--23063
2
18.0
2
94
0
63
47
2
0
50
1.15
23987--24027
5
8.2
5
100
0
82
19
0
19
60
1.36
27751--27799
17
2.9
17
88
8
73
20
22
24
32
1.98
32155--32209
21
2.6
21
80
5
67
12
32
3
50
1.58
38859--41255
323
7.4
322
86
4
3163
32
14
16
37
1.88

Tables:   1

The End!