Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010306.1 Corchorus capsularis cultivar CVL-1 contig10327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24477

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
480--542
30
2.1
30
93
0
108
34
11
11
42
1.76
654--733
29
2.7
29
88
3
106
42
12
16
28
1.84
1793--1838
21
2.2
21
84
7
58
43
32
8
15
1.77
18098--18128
2
15.5
2
100
0
62
0
0
48
51
1.00
21768--21809
3
13.3
3
85
9
57
30
2
0
66
1.04

Tables:   1

The End!