Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010307.1 Corchorus capsularis cultivar CVL-1 contig10328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17945

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4652--4733
41
2.0
41
87
0
119
40
18
12
29
1.87
6242--6273
10
3.2
10
90
0
55
25
40
12
21
1.88
12890--13019
34
4.0
34
76
9
153
9
10
20
59
1.58
12901--13046
63
2.3
64
96
2
276
11
10
23
54
1.67
13497--13555
25
2.4
25
97
2
111
27
0
11
61
1.31
13513--13554
13
3.3
13
73
6
50
23
0
14
61
1.32
13882--13967
43
2.0
43
93
4
149
18
17
6
56
1.62
13895--13965
20
3.4
21
68
31
62
15
15
7
61
1.53
13898--13964
21
3.1
22
64
28
54
16
13
7
62
1.52
17899--17924
4
6.5
4
100
0
52
73
0
0
26
0.84

Tables:   1

The End!