Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010309.1 Corchorus capsularis cultivar CVL-1 contig10330, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44775

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3937--4166
122
1.9
122
88
2
347
13
21
20
44
1.86
4228--4568
44
7.9
43
89
5
435
36
6
28
29
1.82
4344--4464
24
5.4
24
66
22
91
34
7
26
31
1.84
4240--4440
20
9.4
20
64
19
77
34
5
29
29
1.80
4449--4564
20
5.6
20
71
9
88
37
6
25
30
1.80
6176--6264
39
2.2
40
80
7
101
44
12
17
24
1.83
7716--7852
27
4.7
27
87
4
130
44
16
12
27
1.83
7770--7852
31
2.6
32
94
1
141
43
13
14
28
1.83
10486--10515
2
15.0
2
100
0
60
50
0
50
0
1.00
12619--12655
2
18.5
2
100
0
74
51
0
0
48
1.00
18348--18381
16
2.1
16
89
10
52
47
17
17
17
1.84
26961--26986
5
5.2
5
100
0
52
80
0
19
0
0.71
38719--38780
33
1.9
31
93
6
106
32
3
19
45
1.66

Tables:   1

The End!