Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010316.1 Corchorus capsularis cultivar CVL-1 contig10337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23302

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1322--1402
35
2.2
36
82
4
92
38
22
4
34
1.76
1647--1726
28
2.8
28
88
5
106
26
25
12
36
1.91
4328--4396
15
4.6
15
69
7
59
28
27
13
30
1.94
6968--6994
3
9.0
3
100
0
54
66
0
0
33
0.92
7538--7698
78
2.1
78
88
2
234
33
14
1
50
1.52
11027--11087
6
10.3
6
77
15
56
0
6
14
78
0.94
11029--11087
11
5.2
12
78
13
63
0
6
15
77
0.96
17295--17348
24
2.2
24
96
0
99
38
24
24
12
1.90
18322--18382
29
2.2
28
85
11
81
44
4
31
19
1.72

Tables:   1

The End!