Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010320.1 Corchorus capsularis cultivar CVL-1 contig10341, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26760

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65--128
32
2.0
32
96
0
119
17
40
26
15
1.89
2951--2993
19
2.4
17
80
7
50
34
2
51
11
1.51
8433--8495
22
2.9
21
77
17
58
34
14
14
36
1.86
8794--9016
22
10.4
22
70
13
92
36
14
8
40
1.75
8813--9016
44
4.8
44
66
16
122
35
14
8
41
1.77
9049--9116
22
3.1
21
77
8
64
36
14
11
36
1.83
9843--9875
2
16.5
2
100
0
66
48
0
0
51
1.00
20268--20430
30
5.4
30
87
0
191
27
30
20
21
1.98
20253--20370
60
2.0
60
86
0
164
28
25
20
25
1.99
20268--20441
60
2.9
59
86
3
213
27
31
20
21
1.98
20268--20466
90
2.2
90
82
1
229
28
31
19
20
1.97
20294--20466
30
5.8
30
86
2
186
29
31
19
19
1.96

Tables:   1

The End!