Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010321.1 Corchorus capsularis cultivar CVL-1 contig10342, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47583

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38--64
2
13.5
2
100
0
54
48
0
0
51
1.00
1777--1877
50
2.0
50
98
0
193
23
21
28
25
1.99
2097--2140
3
14.7
3
100
0
88
65
0
0
34
0.93
3322--3367
26
1.9
25
83
16
62
34
0
2
63
1.07
6471--6528
30
1.9
30
92
0
98
34
15
1
48
1.55
7244--7270
2
13.5
2
100
0
54
48
0
0
51
1.00
11395--11483
45
2.0
44
91
2
142
33
17
23
24
1.96
12887--12911
11
2.3
11
100
0
50
36
20
8
36
1.82
25679--25765
39
2.2
39
95
2
156
39
6
17
36
1.76
29821--29847
6
4.5
6
100
0
54
51
0
18
29
1.46
31571--31612
22
1.9
22
85
0
57
14
14
11
59
1.61

Tables:   1

The End!