Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010323.1 Corchorus capsularis cultivar CVL-1 contig10344, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27910

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4918--4953
15
2.5
15
95
4
65
66
11
5
16
1.40
6158--6182
13
1.9
13
100
0
50
72
8
4
16
1.24
6206--6240
17
2.1
17
94
0
61
57
11
8
22
1.61
6632--8908
332
6.9
327
77
9
1736
33
14
15
36
1.89
6629--9112
329
7.6
328
77
8
2028
32
14
16
36
1.89
9956--9984
2
14.5
2
100
0
58
48
0
0
51
1.00
12760--12807
20
2.3
21
82
7
62
64
4
10
20
1.41
19341--19381
2
20.5
2
100
0
82
51
0
48
0
1.00
20065--20190
65
1.9
66
90
6
204
34
23
7
34
1.84
26315--26354
3
13.3
3
100
0
80
0
32
67
0
0.91
26600--26628
15
1.9
15
100
0
58
6
20
31
41
1.79

Tables:   1

The End!