Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010324.1 Corchorus capsularis cultivar CVL-1 contig10345, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14360

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1003--1031
4
7.2
4
100
0
58
75
0
24
0
0.80
2950--2991
20
2.1
21
86
8
61
28
7
7
57
1.52
6351--6394
22
2.0
22
86
0
61
4
4
18
72
1.19
8443--8467
2
12.5
2
100
0
50
0
0
48
52
1.00
14047--14150
34
2.9
34
79
16
129
46
8
12
32
1.72
14047--14155
39
2.9
37
83
12
136
45
9
11
33
1.73

Tables:   1

The End!