Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010326.1 Corchorus capsularis cultivar CVL-1 contig10347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38876

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4594--4652
17
3.6
17
77
13
61
38
3
0
57
1.15
4612--4641
2
15.5
2
93
6
53
50
0
0
50
1.00
4741--4800
32
1.9
31
90
10
95
25
8
6
60
1.50
5674--6603
329
2.8
320
81
5
1105
32
15
16
35
1.90
6308--6896
297
2.0
296
92
1
982
32
16
16
34
1.91
6605--9349
321
8.5
323
87
4
3784
33
15
17
34
1.91
9124--9596
247
1.9
243
88
3
707
30
16
18
35
1.93
9352--11845
324
7.7
323
88
3
3529
33
15
16
34
1.91
9352--11845
649
3.8
644
88
4
3597
33
15
16
34
1.91
12476--12553
38
2.1
38
90
0
120
44
6
7
41
1.58
19026--19236
111
1.9
111
81
3
255
18
25
18
36
1.94
22581--22627
24
1.9
25
91
4
78
25
12
12
48
1.77
37230--37258
3
9.7
3
100
0
58
0
65
0
34
0.93
38840--38876
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!