Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010334.1 Corchorus capsularis cultivar CVL-1 contig10355, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74032

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26--896
331
2.6
327
81
7
958
34
13
17
34
1.88
16889--16959
32
2.2
32
85
5
90
28
22
21
28
1.99
17220--17473
129
2.0
127
96
3
476
32
15
9
42
1.79
18408--18461
21
2.5
22
79
8
67
38
11
14
35
1.82
18193--18663
22
21.5
21
67
14
186
36
9
16
37
1.81
18674--18731
22
2.6
23
83
8
75
39
5
10
44
1.61
18354--18743
44
8.9
44
71
10
192
37
8
15
38
1.78
19171--19226
29
1.9
29
92
0
94
35
23
12
28
1.91
19249--19281
16
2.0
17
88
5
50
45
24
0
30
1.53
33948--33987
21
2.0
21
85
5
55
27
17
10
45
1.80
70942--71093
78
1.9
79
93
2
263
52
11
4
31
1.57

Tables:   1

The End!