Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010336.1 Corchorus capsularis cultivar CVL-1 contig10357, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83121

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41991--42038
22
2.3
20
86
10
62
39
25
16
18
1.91
41959--42060
53
1.9
53
87
0
150
37
26
19
16
1.93
42010--42108
31
3.2
31
83
0
117
33
27
20
19
1.96
44187--44229
20
2.2
20
95
0
77
25
25
9
39
1.85
48201--48238
6
6.3
6
93
0
67
15
2
65
15
1.38
56889--56940
25
2.1
24
85
3
68
5
25
1
67
1.23
62991--63046
29
1.9
29
92
0
94
19
30
0
50
1.48
67374--67405
14
2.1
16
88
11
50
3
21
6
68
1.26
78125--81109
332
9.1
331
82
6
2775
33
14
15
35
1.89
78512--81107
994
2.6
991
83
5
3099
34
14
15
35
1.88
78180--82326
331
12.7
332
79
8
3701
33
14
15
35
1.89

Tables:   1

The End!