Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010337.1 Corchorus capsularis cultivar CVL-1 contig10358, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32849

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
628--681
28
1.9
28
92
0
90
53
11
7
27
1.63
699--3275
333
7.7
332
86
3
3311
33
14
15
36
1.88
3030--3538
260
2.0
260
89
1
779
34
13
15
37
1.86
2719--4526
593
3.0
588
78
9
1482
31
15
15
37
1.89
3850--4619
321
2.5
321
82
6
922
31
17
15
36
1.91
4574--4668
48
2.0
48
100
0
190
37
23
8
30
1.84
13064--13094
15
2.1
15
93
0
53
83
0
6
9
0.79
24300--24367
2
36.0
2
76
16
65
47
1
1
50
1.19
24298--24372
39
2.0
37
92
5
123
48
2
1
48
1.24
25555--25719
82
2.0
81
94
1
285
44
14
15
24
1.84
32090--32114
1
25.0
1
100
0
50
100
0
0
0
0.00
32288--32347
28
2.2
27
85
5
77
45
15
13
26
1.83
32607--32637
10
3.1
10
100
0
62
32
29
0
38
1.57

Tables:   1

The End!