Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010338.1 Corchorus capsularis cultivar CVL-1 contig10359, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36880

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7685--7755
29
2.3
31
83
11
85
46
12
18
22
1.82
8684--8721
20
1.9
20
94
0
67
34
13
5
47
1.65
15184--15220
17
2.1
18
85
14
51
48
24
0
27
1.51
16107--16335
112
2.0
112
99
0
449
34
12
21
31
1.91
27588--27750
83
2.0
84
91
1
265
30
8
22
38
1.84
30558--30715
33
4.7
33
82
4
163
31
32
33
3
1.74
30599--30758
36
4.6
36
76
6
134
30
28
35
5
1.80
30558--30754
69
2.9
69
82
2
229
30
29
34
4
1.78
33154--33199
21
2.2
21
88
0
65
23
28
10
36
1.89
33251--33327
32
2.4
32
93
0
127
7
28
46
16
1.75
33378--33534
32
4.9
32
88
0
233
10
42
35
12
1.76
36572--36606
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!