Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010347.1 Corchorus capsularis cultivar CVL-1 contig10368, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47976

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7137--7168
4
8.0
4
100
0
64
75
0
0
25
0.81
8203--8239
6
5.8
6
87
12
56
83
0
16
0
0.64
14424--14464
18
2.3
18
83
8
57
19
31
2
46
1.63
16788--17150
181
2.0
181
100
0
726
39
14
12
33
1.83
17077--17273
100
2.0
99
83
5
245
38
18
12
31
1.87
27952--27990
1
39.0
1
84
0
51
92
0
7
0
0.39
27955--28002
15
3.2
15
90
0
69
87
0
12
0
0.54
27973--28002
4
7.8
4
92
7
53
80
0
20
0
0.72
45651--45675
2
12.5
2
100
0
50
52
0
0
48
1.00
46732--46770
3
13.0
3
100
0
78
66
0
0
33
0.92

Tables:   1

The End!