Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010349.1 Corchorus capsularis cultivar CVL-1 contig10370, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54701

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2068--2102
14
2.5
14
100
0
70
0
0
11
88
0.51
2666--2718
2
29.0
2
82
17
71
54
0
0
45
0.99
2666--2716
9
5.7
9
93
6
86
54
0
0
45
0.99
2666--2718
5
9.7
6
80
19
71
54
0
0
45
0.99
2963--2992
2
15.0
2
100
0
60
50
0
0
50
1.00
3795--3821
2
13.5
2
100
0
54
0
48
0
51
1.00
3821--3845
2
12.5
2
100
0
50
48
0
0
52
1.00
8781--8875
45
2.1
45
100
0
190
30
14
4
50
1.62
20141--20173
2
16.5
2
100
0
66
51
0
0
48
1.00
21456--21509
27
2.0
27
96
0
99
46
7
27
18
1.76
28312--28344
3
11.0
3
100
0
66
66
0
0
33
0.92
39933--39961
2
14.5
2
100
0
58
51
0
0
48
1.00
44023--44069
20
2.3
21
82
14
62
17
6
12
63
1.48
46672--46705
2
17.0
2
100
0
68
50
0
0
50
1.00
50205--50362
79
2.0
79
100
0
316
21
22
22
32
1.98

Tables:   1

The End!