Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010357.1 Corchorus capsularis cultivar CVL-1 contig10378, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56454

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8508--8549
2
20.5
2
85
4
57
45
7
0
47
1.30
8641--8914
108
2.5
109
91
5
428
39
11
1
47
1.48
21924--21953
8
3.8
8
95
0
51
23
33
16
26
1.96
22153--22184
2
16.0
2
100
0
64
50
0
0
50
1.00
23099--23403
152
2.0
153
91
7
492
38
16
10
34
1.84
24020--24058
19
2.1
19
85
0
51
12
25
2
58
1.47
37245--37379
73
1.9
73
95
1
245
29
31
17
21
1.96
54410--54441
15
2.1
15
94
0
55
28
9
6
56
1.55
54680--54712
17
1.9
17
100
0
66
42
3
24
30
1.70
56328--56371
21
2.1
21
86
0
61
22
29
11
36
1.89

Tables:   1

The End!