Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010362.1 Corchorus capsularis cultivar CVL-1 contig10383, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29384

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6853--6887
17
2.1
17
89
10
54
0
17
0
82
0.66
11458--11564
53
2.0
53
92
0
178
42
11
6
40
1.67
13327--13367
13
2.6
17
71
28
54
36
29
7
26
1.83
21095--21212
32
3.7
32
86
1
166
11
11
36
40
1.77
21351--21451
32
3.1
32
88
1
139
6
9
27
55
1.58
21364--21458
16
5.8
16
82
3
118
5
9
29
55
1.53
26572--26620
21
2.3
21
100
0
98
34
24
10
30
1.89
29349--29378
2
15.0
2
100
0
60
0
50
0
50
1.00

Tables:   1

The End!