Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010365.1 Corchorus capsularis cultivar CVL-1 contig10386, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22506

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4416--4457
11
3.8
11
80
0
57
54
0
2
42
1.13
4654--4726
36
2.0
36
91
0
119
27
16
21
34
1.95
10365--10520
53
3.0
53
90
3
230
24
26
27
21
1.99
10374--10527
49
3.1
49
90
3
218
24
26
26
22
2.00
10525--10590
18
3.3
18
66
22
51
42
6
15
36
1.71
10763--10814
26
2.0
26
85
7
70
13
11
23
51
1.73
10988--11012
13
1.9
13
100
0
50
8
8
16
68
1.38
15996--16026
5
6.2
5
96
0
53
19
16
38
25
1.92
18535--18561
2
13.5
2
100
0
54
51
0
0
48
1.00
21241--21274
16
2.1
16
88
0
50
38
0
5
55
1.24
22402--22430
2
15.0
2
92
7
51
51
0
0
48
1.00

Tables:   1

The End!