Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010369.1 Corchorus capsularis cultivar CVL-1 contig10390, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17390

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
990--1023
15
2.2
16
94
5
61
32
5
0
61
1.20
3851--3920
29
2.4
29
85
2
86
41
28
10
20
1.84
4957--4983
7
3.9
7
100
0
54
44
0
11
44
1.39
6212--6545
89
3.7
89
93
5
534
33
13
18
35
1.89
8166--8272
33
3.2
32
82
5
117
10
28
37
23
1.88
13712--13745
8
4.1
8
85
7
50
23
2
14
58
1.50
14710--14816
33
3.2
32
82
5
117
10
28
37
23
1.88
16715--16844
69
1.9
69
96
0
242
35
11
9
43
1.73

Tables:   1

The End!