Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010371.1 Corchorus capsularis cultivar CVL-1 contig10392, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112011

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9183--9245
31
2.0
31
96
0
117
12
30
25
31
1.93
32263--32411
74
2.0
74
97
0
280
38
29
14
18
1.89
41040--41084
20
2.1
23
84
15
62
53
22
4
20
1.63
42854--42890
1
37.0
1
100
0
74
100
0
0
0
0.00
55918--55942
2
12.5
2
100
0
50
48
0
0
52
1.00
62734--62846
45
2.5
45
97
1
208
35
7
27
30
1.83
65524--65552
12
2.5
12
94
5
51
0
13
0
86
0.58
88219--88244
1
26.0
1
100
0
52
100
0
0
0
0.00
89827--89872
23
2.0
23
83
4
58
36
19
4
39
1.72
90365--90394
2
15.0
2
100
0
60
50
0
0
50
1.00
93851--93938
33
2.7
33
82
7
90
18
37
28
15
1.92
105555--105594
21
1.9
21
89
0
62
55
2
0
42
1.13
107378--107405
2
14.0
2
100
0
56
50
0
0
50
1.00
110315--110368
20
2.7
20
80
5
56
27
5
5
61
1.41
111695--111729
17
2.1
17
88
0
52
48
0
11
40
1.39

Tables:   1

The End!