Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010375.1 Corchorus capsularis cultivar CVL-1 contig10396, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50857

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--39
4
10.5
4
94
5
57
71
0
28
0
0.86
24899--24930
3
10.7
3
100
0
64
0
34
0
65
0.93
28105--28135
6
5.2
6
96
0
53
45
0
19
35
1.51
50637--50668
2
16.0
2
100
0
64
50
0
0
50
1.00
50675--50703
6
4.8
6
100
0
58
68
0
31
0
0.89

Tables:   1

The End!