Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010377.1 Corchorus capsularis cultivar CVL-1 contig10398, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30891

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--39
2
19.5
2
100
0
78
51
0
0
48
1.00
6440--6469
2
15.0
2
100
0
60
50
0
0
50
1.00
13562--13591
4
7.5
4
92
0
51
76
3
0
20
0.92
20454--20481
2
14.0
2
100
0
56
50
0
0
50
1.00
22207--22265
19
3.0
19
80
9
73
35
8
22
33
1.84
22207--22264
21
2.9
20
84
5
73
36
8
22
32
1.85
25359--25392
16
2.3
14
90
10
50
52
5
0
41
1.25
26660--26708
2
25.0
2
88
12
75
46
0
2
51
1.12
28790--28818
14
2.1
14
93
6
51
0
27
6
65
1.18
29305--29332
4
7.0
4
100
0
56
75
0
25
0
0.81

Tables:   1

The End!