Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010378.1 Corchorus capsularis cultivar CVL-1 contig10399, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24131

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--36
2
18.0
2
100
0
72
50
0
0
50
1.00
13785--16909
638
4.9
635
83
5
3543
36
16
14
33
1.88
16697--17102
212
1.9
214
84
5
545
36
16
13
33
1.88
16911--18646
323
5.4
321
85
5
2088
36
15
13
33
1.88
16919--18646
649
2.7
638
82
8
2183
36
15
13
33
1.87
19180--19226
3
16.7
3
82
12
64
0
29
0
70
0.88
20930--22740
325
5.5
323
70
12
1161
35
16
14
32
1.90
21961--22034
34
2.2
34
97
2
141
40
16
10
32
1.83
22004--22738
320
2.3
318
82
5
874
35
17
15
31
1.91
22535--22999
249
1.9
247
83
4
614
35
16
15
32
1.90
22747--24131
319
4.3
318
84
5
1613
36
17
13
32
1.89

Tables:   1

The End!