Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010381.1 Corchorus capsularis cultivar CVL-1 contig10402, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30749

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5601--5635
2
17.5
2
100
0
70
0
48
0
51
1.00
12708--12801
33
2.9
34
86
9
126
11
31
41
14
1.82
13620--13653
14
2.4
14
85
0
50
44
0
55
0
0.99
14700--14737
11
3.5
11
85
10
51
57
2
0
39
1.12
15864--16016
83
1.8
83
98
0
297
29
16
15
38
1.90
16960--16993
7
4.7
7
85
7
50
14
0
0
85
0.60
16960--16992
15
2.1
16
94
5
59
12
0
0
87
0.53
20583--30749
334
30.3
331
84
4
11598
32
15
15
35
1.90
20583--30749
674
15.2
663
84
4
12351
32
15
15
35
1.90

Tables:   1

The End!