Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010382.1 Corchorus capsularis cultivar CVL-1 contig10403, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61708

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2495
333
7.5
332
82
4
2813
31
15
16
36
1.90
1--2528
997
2.5
983
84
5
3098
32
15
16
36
1.90
27089--27119
2
15.5
2
100
0
62
51
0
0
48
1.00
37256--37292
18
2.1
18
100
0
74
48
5
16
29
1.68
38402--38429
2
14.0
2
100
0
56
50
0
0
50
1.00
42491--42526
3
12.0
3
87
0
54
2
30
2
63
1.22
56346--56373
1
28.0
1
100
0
56
0
0
0
100
0.00
60132--60427
109
2.6
110
92
4
461
37
11
1
49
1.49
60132--60427
110
2.7
110
91
4
461
37
11
1
49
1.49

Tables:   1

The End!