Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010383.1 Corchorus capsularis cultivar CVL-1 contig10404, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40193

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1348--1400
17
3.2
16
78
7
61
45
16
7
30
1.75
2412--2466
12
4.5
12
93
4
92
34
14
23
27
1.94
2412--2466
25
2.2
24
93
3
92
34
14
23
27
1.94
3528--3584
3
19.3
3
92
3
98
33
33
0
33
1.58
10494--10546
26
2.0
28
88
7
83
58
1
13
26
1.45
20449--20765
157
2.0
157
99
0
625
31
7
18
41
1.80
24502--24536
18
1.9
18
88
0
52
45
14
22
17
1.84
26684--26794
54
2.2
50
84
11
136
19
28
12
38
1.89
30798--30908
54
2.2
52
82
14
133
18
28
15
37
1.91
38810--38862
27
2.0
27
96
0
97
32
41
3
22
1.72

Tables:   1

The End!