Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010385.1 Corchorus capsularis cultivar CVL-1 contig10406, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46196

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5181--5214
11
3.1
11
91
0
50
55
2
14
26
1.53
5181--5223
22
2.0
21
86
8
61
55
4
13
25
1.58
12118--12183
33
2.0
33
100
0
132
21
27
27
24
1.99
15468--15553
6
13.8
6
70
11
57
3
43
2
51
1.31
25693--25751
30
2.0
30
96
0
109
35
25
11
27
1.91
30676--31095
209
2.0
209
98
0
804
25
17
16
40
1.90
32382--32414
16
2.1
16
100
0
66
48
0
21
30
1.50
37344--37372
5
5.8
5
100
0
58
17
0
0
82
0.66

Tables:   1

The End!