Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010386.1 Corchorus capsularis cultivar CVL-1 contig10407, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40157

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2578--2617
19
2.1
19
85
0
53
17
10
27
45
1.80
7288--7317
1
30.0
1
93
0
51
0
3
0
96
0.21
10404--10446
8
5.4
8
88
0
50
13
11
23
51
1.74
15907--16038
42
3.1
42
98
0
255
21
20
26
31
1.98
18360--18499
69
2.0
69
97
0
262
16
24
27
31
1.96
20502--20643
71
2.0
71
92
0
239
27
18
21
33
1.96
32474--32503
1
30.0
1
100
0
60
100
0
0
0
0.00
33229--33274
23
2.0
23
91
4
76
36
10
39
13
1.79
34787--34868
24
3.4
24
69
21
71
43
23
7
25
1.79
37305--40157
321
8.9
320
84
4
3082
35
13
15
35
1.87

Tables:   1

The End!