Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010391.1 Corchorus capsularis cultivar CVL-1 contig10412, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3571

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
865--951
45
1.9
45
88
0
129
24
28
17
29
1.97
1453--1534
29
3.0
29
77
13
93
3
19
28
48
1.65
1487--1554
12
5.7
12
71
25
54
4
22
26
47
1.70
1482--1554
24
3.0
24
95
0
128
4
20
27
47
1.68
1501--1544
14
3.4
14
70
23
51
2
20
29
47
1.62
1532--2074
53
10.2
53
92
0
809
6
33
27
31
1.83
1532--2194
159
4.1
159
87
4
864
6
33
28
32
1.83
2024--2155
70
1.9
69
90
4
212
4
32
27
35
1.77
2082--2185
53
2.0
53
85
9
144
5
33
28
31
1.81

Tables:   1

The End!