Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010396.1 Corchorus capsularis cultivar CVL-1 contig10417, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24656

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2141
670
3.2
658
83
5
2558
31
15
17
35
1.91
1--2141
332
6.4
330
84
4
2636
31
15
17
35
1.91
4665--5084
124
3.4
121
88
4
596
52
3
9
35
1.51
5512--5744
70
3.2
70
82
12
290
37
12
0
48
1.45
5512--5750
78
3.2
77
88
9
343
37
12
0
49
1.44
8358--8404
2
24.0
2
83
12
62
48
2
0
48
1.13
15419--15794
190
2.0
189
97
0
707
47
23
7
22
1.76
17033--17322
107
2.8
104
84
6
388
43
6
9
40
1.64
19185--19400
108
2.0
108
100
0
432
39
17
18
24
1.92
24485--24562
29
2.7
28
77
15
86
39
29
14
16
1.88

Tables:   1

The End!