Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010397.1 Corchorus capsularis cultivar CVL-1 contig10418, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51859

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5928--5954
4
6.8
4
100
0
54
51
0
0
48
1.00
8314--8342
2
14.5
2
100
0
58
48
0
0
51
1.00
22489--22545
27
2.1
27
100
0
114
14
14
8
63
1.52
22495--22544
14
3.7
14
72
17
52
14
16
4
66
1.40
22867--22955
44
2.0
44
100
0
178
31
4
25
38
1.76
25578--25911
27
12.5
27
88
1
431
24
38
14
23
1.92
25993--26177
27
6.9
27
89
1
264
25
25
21
27
1.99
25993--26177
54
3.4
54
92
1
300
25
25
21
27
1.99
28762--28897
66
2.1
65
86
5
186
24
24
14
36
1.93
33788--33819
12
2.7
12
95
0
55
0
12
9
78
0.97
38057--38114
28
2.1
28
90
0
89
36
15
13
34
1.87
40334--40809
237
2.0
238
93
0
810
26
14
20
38
1.91
51423--51450
13
2.2
13
100
0
56
32
21
21
25
1.98

Tables:   1

The End!