Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010400.1 Corchorus capsularis cultivar CVL-1 contig10421, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16473

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7508--7532
3
8.3
3
100
0
50
0
36
0
64
0.94
9394--9448
27
2.0
27
89
6
85
60
7
23
9
1.52
10200--10232
7
4.9
7
88
7
50
0
24
0
75
0.80
11546--13977
333
7.3
329
86
4
3169
35
17
13
34
1.88
14036--14082
24
1.9
25
91
4
78
48
10
12
27
1.74
14219--15879
331
5.0
330
89
3
2450
35
17
12
34
1.88
14219--15879
333
5.0
333
89
3
2480
35
17
12
34
1.88
15804--15950
70
2.1
70
91
2
242
35
16
8
40
1.78
15455--16269
406
2.0
406
93
2
1417
35
17
11
35
1.86
16042--16473
227
1.9
229
91
1
708
34
17
14
33
1.90

Tables:   1

The End!