Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWWV01010409.1 Corchorus capsularis cultivar CVL-1 contig10430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 111665
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Found at i:6199 original size:25 final size:26
Alignment explanation
Indices: 6151--6200 Score: 75
Period size: 25 Copynumber: 2.0 Consensus size: 26
6141 TGGAGTTAGT
**
6151 TAGTTAGTTAATTTTTTTGTTGGCAA
1 TAGTTAGTTAATTTTTTTAATGGCAA
6177 TAGTTAGTT-ATTTTTTTAATGGCA
1 TAGTTAGTTAATTTTTTTAATGGCA
6201 CAAATTATTT
Statistics
Matches: 22, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
25 13 0.59
26 9 0.41
ACGTcount: A:0.24, C:0.04, G:0.18, T:0.54
Consensus pattern (26 bp):
TAGTTAGTTAATTTTTTTAATGGCAA
Found at i:17734 original size:18 final size:18
Alignment explanation
Indices: 17711--17750 Score: 64
Period size: 18 Copynumber: 2.3 Consensus size: 18
17701 TTTATTACAT
*
17711 TATTATTATATTATATTA
1 TATTATTATATTAAATTA
17729 TATTATTATATTAAATTA
1 TATTATTATATTAAATTA
17747 -ATTA
1 TATTA
17751 ATTTCTTCGT
Statistics
Matches: 21, Mismatches: 1, Indels: 1
0.91 0.04 0.04
Matches are distributed among these distances:
17 4 0.19
18 17 0.81
ACGTcount: A:0.42, C:0.00, G:0.00, T:0.57
Consensus pattern (18 bp):
TATTATTATATTAAATTA
Found at i:17812 original size:15 final size:16
Alignment explanation
Indices: 17792--17821 Score: 53
Period size: 15 Copynumber: 1.9 Consensus size: 16
17782 CACGATTAAC
17792 TAAAATAAA-ACTAAT
1 TAAAATAAATACTAAT
17807 TAAAATAAATACTAA
1 TAAAATAAATACTAA
17822 ATAAGAACAA
Statistics
Matches: 14, Mismatches: 0, Indels: 1
0.93 0.00 0.07
Matches are distributed among these distances:
15 9 0.64
16 5 0.36
ACGTcount: A:0.67, C:0.07, G:0.00, T:0.27
Consensus pattern (16 bp):
TAAAATAAATACTAAT
Found at i:18283 original size:2 final size:2
Alignment explanation
Indices: 18276--18306 Score: 62
Period size: 2 Copynumber: 15.5 Consensus size: 2
18266 TGATATAGTG
18276 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
18307 GTGACATTGA
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 29 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:20126 original size:45 final size:45
Alignment explanation
Indices: 20077--20166 Score: 171
Period size: 45 Copynumber: 2.0 Consensus size: 45
20067 CTTATGAATA
*
20077 TATTTTGTCAATTATATGGATTTGTTTAGGACACCATGTTGAGTT
1 TATTTTATCAATTATATGGATTTGTTTAGGACACCATGTTGAGTT
20122 TATTTTATCAATTATATGGATTTGTTTAGGACACCATGTTGAGTT
1 TATTTTATCAATTATATGGATTTGTTTAGGACACCATGTTGAGTT
20167 GAGATCATAT
Statistics
Matches: 44, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
45 44 1.00
ACGTcount: A:0.26, C:0.09, G:0.19, T:0.47
Consensus pattern (45 bp):
TATTTTATCAATTATATGGATTTGTTTAGGACACCATGTTGAGTT
Found at i:25325 original size:32 final size:31
Alignment explanation
Indices: 25289--25391 Score: 120
Period size: 32 Copynumber: 3.2 Consensus size: 31
25279 TCCGAACTGA
* *
25289 GACCCGCAACCCAGATGACCTGAGACCCGAAT
1 GACCCG-AACCCAGATGACCCGAAACCCGAAT
25321 GACCCGTAACCCAGATGACCCGAAACCC-AGAT
1 GACCCG-AACCCAGATGACCCGAAACCCGA-AT
25353 GACCCGAGACCC-GTATGACCCGAAACCCGAAT
1 GACCCGA-ACCCAG-ATGACCCGAAACCCGAAT
*
25385 AACCCGA
1 GACCCGA
25392 GAAGTTAACT
Statistics
Matches: 63, Mismatches: 4, Indels: 8
0.84 0.05 0.11
Matches are distributed among these distances:
31 3 0.05
32 59 0.94
33 1 0.02
ACGTcount: A:0.33, C:0.38, G:0.20, T:0.09
Consensus pattern (31 bp):
GACCCGAACCCAGATGACCCGAAACCCGAAT
Found at i:25341 original size:48 final size:48
Alignment explanation
Indices: 25289--25380 Score: 148
Period size: 48 Copynumber: 1.9 Consensus size: 48
25279 TCCGAACTGA
* * *
25289 GACCCGCAACCCAGATGACCTGAGACCCGAATGACCCGTAACCCAGAT
1 GACCCGAAACCCAGATGACCCGAGACCCGAATGACCCGAAACCCAGAT
*
25337 GACCCGAAACCCAGATGACCCGAGACCCGTATGACCCGAAACCC
1 GACCCGAAACCCAGATGACCCGAGACCCGAATGACCCGAAACCC
25381 GAATAACCCG
Statistics
Matches: 40, Mismatches: 4, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
48 40 1.00
ACGTcount: A:0.32, C:0.39, G:0.21, T:0.09
Consensus pattern (48 bp):
GACCCGAAACCCAGATGACCCGAGACCCGAATGACCCGAAACCCAGAT
Found at i:25381 original size:16 final size:16
Alignment explanation
Indices: 25289--25380 Score: 107
Period size: 16 Copynumber: 5.8 Consensus size: 16
25279 TCCGAACTGA
*
25289 GACCCGCAACCCAGAT
1 GACCCGAAACCCAGAT
* *
25305 GACCTGAGACCC-GAAT
1 GACCCGAAACCCAG-AT
*
25321 GACCCGTAACCCAGAT
1 GACCCGAAACCCAGAT
25337 GACCCGAAACCCAGAT
1 GACCCGAAACCCAGAT
*
25353 GACCCGAGACCC-GTAT
1 GACCCGAAACCCAG-AT
25369 GACCCGAAACCC
1 GACCCGAAACCC
25381 GAATAACCCG
Statistics
Matches: 64, Mismatches: 9, Indels: 6
0.81 0.11 0.08
Matches are distributed among these distances:
15 2 0.03
16 61 0.95
17 1 0.02
ACGTcount: A:0.32, C:0.39, G:0.21, T:0.09
Consensus pattern (16 bp):
GACCCGAAACCCAGAT
Found at i:25389 original size:16 final size:16
Alignment explanation
Indices: 25289--25391 Score: 95
Period size: 16 Copynumber: 6.4 Consensus size: 16
25279 TCCGAACTGA
*
25289 GACCCGCAACCC-AGAT
1 GACCCGAAACCCGA-AT
* *
25305 GACCTGAGACCCGAAT
1 GACCCGAAACCCGAAT
*
25321 GACCCGTAACCC-AGAT
1 GACCCGAAACCCGA-AT
25337 GACCCGAAACCC-AGAT
1 GACCCGAAACCCGA-AT
* *
25353 GACCCGAGACCCGTAT
1 GACCCGAAACCCGAAT
25369 GACCCGAAACCCGAAT
1 GACCCGAAACCCGAAT
*
25385 AACCCGA
1 GACCCGA
25392 GAAGTTAACT
Statistics
Matches: 72, Mismatches: 12, Indels: 6
0.80 0.13 0.07
Matches are distributed among these distances:
15 1 0.01
16 70 0.97
17 1 0.01
ACGTcount: A:0.33, C:0.38, G:0.20, T:0.09
Consensus pattern (16 bp):
GACCCGAAACCCGAAT
Found at i:25390 original size:48 final size:48
Alignment explanation
Indices: 25290--25391 Score: 143
Period size: 48 Copynumber: 2.1 Consensus size: 48
25280 CCGAACTGAG
* * * *
25290 ACCCGCAACCCAGATGACCTGAGACCCGAATGACCCGTAACCCAGATG
1 ACCCGAAACCCAGATGACCCGAGACCCGAATGACCCGAAACCCAGATA
*
25338 ACCCGAAACCCAGATGACCCGAGACCCGTATGACCCGAAACCC-GAATA
1 ACCCGAAACCCAGATGACCCGAGACCCGAATGACCCGAAACCCAG-ATA
25386 ACCCGA
1 ACCCGA
25392 GAAGTTAACT
Statistics
Matches: 48, Mismatches: 5, Indels: 2
0.87 0.09 0.04
Matches are distributed among these distances:
47 1 0.02
48 47 0.98
ACGTcount: A:0.33, C:0.38, G:0.20, T:0.09
Consensus pattern (48 bp):
ACCCGAAACCCAGATGACCCGAGACCCGAATGACCCGAAACCCAGATA
Found at i:27620 original size:11 final size:11
Alignment explanation
Indices: 27595--27641 Score: 60
Period size: 11 Copynumber: 4.3 Consensus size: 11
27585 ATTTATTCAT
27595 TATTAATTA-A
1 TATTAATTAGA
*
27605 CTATTAGTTAGA
1 -TATTAATTAGA
*
27617 TATTAATTAGC
1 TATTAATTAGA
27628 TATTAATTAGA
1 TATTAATTAGA
27639 TAT
1 TAT
27642 AGTATAATGA
Statistics
Matches: 31, Mismatches: 4, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
11 30 0.97
12 1 0.03
ACGTcount: A:0.40, C:0.04, G:0.09, T:0.47
Consensus pattern (11 bp):
TATTAATTAGA
Found at i:27621 original size:22 final size:22
Alignment explanation
Indices: 27595--27641 Score: 76
Period size: 22 Copynumber: 2.1 Consensus size: 22
27585 ATTTATTCAT
*
27595 TATTAATTAACTATTAGTTAGA
1 TATTAATTAACTATTAATTAGA
*
27617 TATTAATTAGCTATTAATTAGA
1 TATTAATTAACTATTAATTAGA
27639 TAT
1 TAT
27642 AGTATAATGA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
22 23 1.00
ACGTcount: A:0.40, C:0.04, G:0.09, T:0.47
Consensus pattern (22 bp):
TATTAATTAACTATTAATTAGA
Found at i:28612 original size:12 final size:12
Alignment explanation
Indices: 28595--28621 Score: 54
Period size: 12 Copynumber: 2.2 Consensus size: 12
28585 TATGGATTAT
28595 TTATTTATTTAC
1 TTATTTATTTAC
28607 TTATTTATTTAC
1 TTATTTATTTAC
28619 TTA
1 TTA
28622 AGTTTAATTT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 15 1.00
ACGTcount: A:0.26, C:0.07, G:0.00, T:0.67
Consensus pattern (12 bp):
TTATTTATTTAC
Found at i:32490 original size:14 final size:16
Alignment explanation
Indices: 32471--32508 Score: 53
Period size: 16 Copynumber: 2.5 Consensus size: 16
32461 TCGATCAAAT
32471 GTCGGGTC-ATT-TGG
1 GTCGGGTCAATTCTGG
32485 GTCGGGTCAATTCTGG
1 GTCGGGTCAATTCTGG
*
32501 GTTGGGTC
1 GTCGGGTC
32509 GTTTTCTGTT
Statistics
Matches: 21, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
14 8 0.38
15 3 0.14
16 10 0.48
ACGTcount: A:0.08, C:0.16, G:0.42, T:0.34
Consensus pattern (16 bp):
GTCGGGTCAATTCTGG
Found at i:32524 original size:17 final size:17
Alignment explanation
Indices: 32504--32542 Score: 69
Period size: 17 Copynumber: 2.3 Consensus size: 17
32494 ATTCTGGGTT
*
32504 GGGTCGTTTTCTGTTTC
1 GGGTCGTTTTCGGTTTC
32521 GGGTCGTTTTCGGTTTC
1 GGGTCGTTTTCGGTTTC
32538 GGGTC
1 GGGTC
32543 ATACGGTTTG
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
17 21 1.00
ACGTcount: A:0.00, C:0.18, G:0.36, T:0.46
Consensus pattern (17 bp):
GGGTCGTTTTCGGTTTC
Found at i:33538 original size:30 final size:28
Alignment explanation
Indices: 33478--33539 Score: 88
Period size: 28 Copynumber: 2.1 Consensus size: 28
33468 AATAGCACAA
*
33478 TATAATCCATTTTATTTATATTATAACT
1 TATAATCCATTTTATTTATATTAAAACT
*
33506 TATAATCCATTTTATTTACCTCTTAAAACT
1 TATAATCCATTTTATTTA--TATTAAAACT
33536 TATA
1 TATA
33540 TAACTTATAA
Statistics
Matches: 30, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
28 18 0.60
30 12 0.40
ACGTcount: A:0.35, C:0.15, G:0.00, T:0.50
Consensus pattern (28 bp):
TATAATCCATTTTATTTATATTAAAACT
Found at i:33950 original size:30 final size:30
Alignment explanation
Indices: 33914--33986 Score: 146
Period size: 30 Copynumber: 2.4 Consensus size: 30
33904 TTTGACTCAT
33914 TTCGGGTTCGGGTTGTTTGGATTCGGGTAA
1 TTCGGGTTCGGGTTGTTTGGATTCGGGTAA
33944 TTCGGGTTCGGGTTGTTTGGATTCGGGTAA
1 TTCGGGTTCGGGTTGTTTGGATTCGGGTAA
33974 TTCGGGTTCGGGT
1 TTCGGGTTCGGGT
33987 ACCCAAAAAT
Statistics
Matches: 43, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
30 43 1.00
ACGTcount: A:0.08, C:0.11, G:0.41, T:0.40
Consensus pattern (30 bp):
TTCGGGTTCGGGTTGTTTGGATTCGGGTAA
Found at i:33983 original size:15 final size:15
Alignment explanation
Indices: 33914--33987 Score: 76
Period size: 15 Copynumber: 4.9 Consensus size: 15
33904 TTTGACTCAT
**
33914 TTCGGGTTCGGGTTG
1 TTCGGGTTCGGGTAA
* *
33929 TTTGGATTCGGGTAA
1 TTCGGGTTCGGGTAA
**
33944 TTCGGGTTCGGGTTG
1 TTCGGGTTCGGGTAA
* *
33959 TTTGGATTCGGGTAA
1 TTCGGGTTCGGGTAA
33974 TTCGGGTTCGGGTA
1 TTCGGGTTCGGGTA
33988 CCCAAAAATT
Statistics
Matches: 45, Mismatches: 14, Indels: 0
0.76 0.24 0.00
Matches are distributed among these distances:
15 45 1.00
ACGTcount: A:0.09, C:0.11, G:0.41, T:0.39
Consensus pattern (15 bp):
TTCGGGTTCGGGTAA
Found at i:50372 original size:24 final size:25
Alignment explanation
Indices: 50340--50403 Score: 105
Period size: 24 Copynumber: 2.6 Consensus size: 25
50330 AAAGTCAATT
*
50340 AAAATAACTTAATTATTTTCACC-A
1 AAAAAAACTTAATTATTTTCACCAA
50364 AAAAAAACTTAATTATTTTCACCAA
1 AAAAAAACTTAATTATTTTCACCAA
50389 AAAAAAAC-TAATTAT
1 AAAAAAACTTAATTAT
50404 GATTGAAATA
Statistics
Matches: 38, Mismatches: 1, Indels: 2
0.93 0.02 0.05
Matches are distributed among these distances:
24 29 0.76
25 9 0.24
ACGTcount: A:0.53, C:0.14, G:0.00, T:0.33
Consensus pattern (25 bp):
AAAAAAACTTAATTATTTTCACCAA
Found at i:62221 original size:22 final size:22
Alignment explanation
Indices: 62179--62222 Score: 70
Period size: 22 Copynumber: 2.0 Consensus size: 22
62169 TATTCATATG
* *
62179 AAATTATGATAATTTCTCTATT
1 AAATTATGATAATTACACTATT
62201 AAATTATGATAATTACACTATT
1 AAATTATGATAATTACACTATT
62223 TTTTATGATC
Statistics
Matches: 20, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
22 20 1.00
ACGTcount: A:0.41, C:0.09, G:0.05, T:0.45
Consensus pattern (22 bp):
AAATTATGATAATTACACTATT
Found at i:62262 original size:22 final size:22
Alignment explanation
Indices: 62237--62975 Score: 226
Period size: 22 Copynumber: 33.8 Consensus size: 22
62227 ATGATCCCAT
62237 TATGAAATTTTGATAACCTTCC
1 TATGAAATTTTGATAACCTTCC
* *** *
62259 TATGAAATTTTAATAATGATAC
1 TATGAAATTTTGATAACCTTCC
* * **
62281 TATG-AATTTCGAGAACCTTTT
1 TATGAAATTTTGATAACCTTCC
* ** * *
62302 TAT-AATTTTTTTTAACGTTCT
1 TATGAAATTTTGATAACCTTCC
* *
62323 TATGAAATTTTGTTAACCTCCC
1 TATGAAATTTTGATAACCTTCC
* * *
62345 TAAGGAATTTTGA-AGACC-TCAA
1 TATGAAATTTTGATA-ACCTTC-C
62367 TATGAAATTTTGATAA-CTTCGC
1 TATGAAATTTTGATAACCTTC-C
* **
62389 AATGAAATTTTGATAACCAACAC
1 TATGAAATTTTGATAACCTTC-C
* * *
62412 AATGAGA-TGTGATAACC-TCC
1 TATGAAATTTTGATAACCTTCC
* * * *
62432 ATATGATATATTGATAACC-ACGT
1 -TATGAAATTTTGATAACCTTC-C
* * *
62455 TATGAAAATTTAAAAACC-TCC
1 TATGAAATTTTGATAACCTTCC
* *
62476 ATATG-AATTGTT-AGTAATC-ACAC
1 -TATGAAATT-TTGA-TAACCTTC-C
* * *
62499 TCTGAAATTTTGATAATC-ACAC
1 TATGAAATTTTGATAACCTTC-C
*
62521 TATGAAATTGTGATAACC-TCGC
1 TATGAAATTTTGATAACCTTC-C
* *
62543 TATGAAATTTTGTTAAATCTTCC
1 TATGAAATTTTGAT-AACCTTCC
* ** **
62566 TATAAAATTTTGATAATTTTTT
1 TATGAAATTTTGATAACCTTCC
* *
62588 TATGAAATCTTGATAA-C-TAC
1 TATGAAATTTTGATAACCTTCC
62608 -A-G--ATTTTGATAACC-TCC
1 TATGAAATTTTGATAACCTTCC
* * *
62625 ATATGAATTTTTAATAACC-TCAT
1 -TATGAAATTTTGATAACCTTC-C
* *
62648 TATGAAATTTTGTTAACCTCCC
1 TATGAAATTTTGATAACCTTCC
* * *
62670 TATGAAATTTTGATCTA-CATAC
1 TATGAAATTTTGAT-AACCTTCC
*
62692 TATGAAATTTTGATAA-CTCTCT
1 TATGAAATTTTGATAACCT-TCC
** * * **
62714 TATGACGTTTT-AAAAACTAAAC
1 TATGAAATTTTGATAACCT-TCC
*
62736 TATGAAAATTTTGATAACCTTCA
1 TATG-AAATTTTGATAACCTTCC
* * * *
62759 TAGGATATTTTGATATCCTCCC
1 TATGAAATTTTGATAACCTTCC
* ** **
62781 TATGTAATTTCAATAACCAACC
1 TATGAAATTTTGATAACCTTCC
* * *
62803 TAAGAAATTTTAATAACTTGATCC
1 TATGAAATTTTGATAACCT--TCC
* * **
62827 TATGAAATTTTGGTAACCATAT
1 TATGAAATTTTGATAACCTTCC
* *
62849 TATGAAA-TTTGGTAACC-ACAC
1 TATGAAATTTTGATAACCTTC-C
* *
62870 TATGGAATTTTGATAA-CTTCAA
1 TATGAAATTTTGATAACCTTC-C
*
62892 TATGAAATTTT-AGTAACC-ACAC
1 TATGAAATTTTGA-TAACCTTC-C
62914 TATGAAATTTTGATAACC-TCC
1 TATGAAATTTTGATAACCTTCC
* * * * *
62935 TCATGAAATTATAATAAACATCT
1 T-ATGAAATTTTGATAACCTTCC
62958 TATGAAATTTTGATAACC
1 TATGAAATTTTGATAACC
62976 ACATAGAGAA
Statistics
Matches: 522, Mismatches: 154, Indels: 82
0.69 0.20 0.11
Matches are distributed among these distances:
16 9 0.02
17 3 0.01
18 1 0.00
19 2 0.00
20 3 0.01
21 63 0.12
22 371 0.71
23 47 0.09
24 23 0.04
ACGTcount: A:0.37, C:0.15, G:0.10, T:0.38
Consensus pattern (22 bp):
TATGAAATTTTGATAACCTTCC
Found at i:67983 original size:3 final size:3
Alignment explanation
Indices: 67975--68006 Score: 64
Period size: 3 Copynumber: 10.7 Consensus size: 3
67965 TTAAAACGGT
67975 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TT
1 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TT
68007 TTGAAATAGG
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 29 1.00
ACGTcount: A:0.31, C:0.00, G:0.00, T:0.69
Consensus pattern (3 bp):
TTA
Found at i:92526 original size:17 final size:17
Alignment explanation
Indices: 92485--92534 Score: 57
Period size: 17 Copynumber: 2.9 Consensus size: 17
92475 CCATGTAATC
*
92485 TTTGATCACCGGTGA-T
1 TTTGATCACTGGTGATT
*
92501 CTTGCATCACTGGTGATT
1 TTTG-ATCACTGGTGATT
*
92519 TTTGATCACTAGTGAT
1 TTTGATCACTGGTGAT
92535 CTGGGGGTAT
Statistics
Matches: 28, Mismatches: 4, Indels: 3
0.80 0.11 0.09
Matches are distributed among these distances:
16 3 0.11
17 21 0.75
18 4 0.14
ACGTcount: A:0.20, C:0.18, G:0.22, T:0.40
Consensus pattern (17 bp):
TTTGATCACTGGTGATT
Found at i:94058 original size:12 final size:12
Alignment explanation
Indices: 94043--94067 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
94033 TGAGACACAT
94043 TTAACAAATCAA
1 TTAACAAATCAA
94055 TTAACAAATCAA
1 TTAACAAATCAA
94067 T
1 T
94068 GAGGTGCTAC
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.56, C:0.16, G:0.00, T:0.28
Consensus pattern (12 bp):
TTAACAAATCAA
Done.