Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010412.1 Corchorus capsularis cultivar CVL-1 contig10433, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15665

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
253--425
52
3.3
52
91
5
262
32
2
6
58
1.38
6587--6649
29
2.1
30
94
2
110
49
4
19
26
1.68
7014--7075
18
3.2
21
60
21
53
37
4
8
50
1.54
7015--7088
37
2.0
37
100
0
148
35
8
8
48
1.62
7375--7408
16
2.2
16
89
5
52
8
5
41
44
1.60
8274--8332
22
2.7
23
72
17
61
40
1
5
52
1.33
11345--11472
64
2.0
64
95
0
229
17
19
10
52
1.73

Tables:   1

The End!