Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010414.1 Corchorus capsularis cultivar CVL-1 contig10435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48377

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
534--616
35
2.4
35
85
0
103
44
21
10
22
1.83
901--925
13
1.9
13
100
0
50
48
16
0
36
1.46
18160--18212
22
2.5
22
90
3
81
35
13
13
37
1.83
19558--19594
7
5.3
7
100
0
74
56
43
0
0
0.99
21425--21467
1
43.0
1
100
0
86
0
0
0
100
0.00
29736--29823
45
2.0
45
93
0
149
52
21
11
14
1.73
30005--30040
2
18.0
2
100
0
72
50
0
0
50
1.00
35321--35906
299
2.0
299
99
0
1163
36
14
13
35
1.86
36098--36229
66
2.0
67
92
1
221
50
2
0
46
1.19
37035--37068
17
2.0
17
94
0
59
29
5
14
50
1.67
40524--40581
29
2.0
29
96
0
107
22
18
17
41
1.90
41573--41640
34
2.0
34
97
0
127
55
5
7
30
1.51
41868--41923
27
2.0
28
89
6
87
42
10
3
42
1.56
41911--41941
15
2.1
15
100
0
62
32
0
12
54
1.38

Tables:   1

The End!