Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010421.1 Corchorus capsularis cultivar CVL-1 contig10442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13438

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2790--2833
2
23.0
2
86
9
65
47
0
2
50
1.13
3364--3567
106
1.9
107
90
3
331
39
7
8
44
1.64
4737--4859
32
3.8
32
89
2
183
12
40
33
13
1.82
4737--4858
65
1.9
65
91
0
199
12
40
32
13
1.82
8392--8455
31
2.1
31
87
0
92
34
26
21
17
1.95
10401--10432
2
16.0
2
93
0
55
50
3
0
46
1.17
12941--12990
25
2.0
25
100
0
100
32
28
12
28
1.92

Tables:   1

The End!