Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010425.1 Corchorus capsularis cultivar CVL-1 contig10446, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9566

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--50
2
25.0
2
100
0
100
50
0
0
50
1.00
1430--1653
112
2.0
112
100
0
448
33
5
20
41
1.75
1904--1951
13
3.7
13
86
8
62
16
6
16
60
1.55
3361--3394
17
1.9
18
88
5
52
23
26
5
44
1.76
3688--3904
75
2.9
75
96
3
397
38
10
2
48
1.50
4891--4938
19
2.5
19
83
6
53
58
2
4
35
1.29
5157--5182
2
13.0
2
100
0
52
50
0
0
50
1.00
6409--6502
45
2.2
43
83
7
111
38
21
5
35
1.76

Tables:   1

The End!