Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010430.1 Corchorus capsularis cultivar CVL-1 contig10451, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34087

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3553--3930
154
2.5
154
94
2
674
34
14
10
41
1.80
5312--5482
87
2.0
87
96
0
315
21
20
35
22
1.96
6798--7267
67
7.0
67
82
5
509
43
16
18
21
1.88
6798--7270
135
3.5
134
85
5
553
43
16
18
21
1.88
10534--10576
23
1.9
23
90
4
70
44
13
18
23
1.86
13364--13417
16
3.6
16
66
19
53
44
16
5
33
1.71
16031--16086
27
2.1
27
87
6
80
12
17
7
62
1.51
17809--17870
31
2.0
31
87
6
90
30
14
4
50
1.64
28736--28796
31
2.0
31
83
0
59
19
21
24
34
1.96
28724--28880
84
1.9
84
83
0
206
20
19
23
36
1.95
28705--28911
115
1.8
115
85
0
297
19
21
24
34
1.96
28806--28924
31
3.8
31
96
0
211
16
24
26
32
1.96
29665--29734
30
2.4
30
83
7
81
17
25
14
42
1.86

Tables:   1

The End!