Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010435.1 Corchorus capsularis cultivar CVL-1 contig10456, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25154

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2424--2482
22
2.8
21
87
7
77
79
1
5
13
0.97
16184--16238
27
2.0
27
82
6
67
18
30
5
45
1.72
24087--24115
15
1.9
15
100
0
58
55
0
3
41
1.17
24610--24656
13
3.8
12
78
13
51
40
0
4
55
1.19
24840--24912
16
4.5
17
80
10
82
42
36
12
8
1.72
24823--24912
32
2.8
32
84
3
110
42
34
12
11
1.78

Tables:   1

The End!