Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010443.1 Corchorus capsularis cultivar CVL-1 contig10464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8670

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
943--1028
22
4.0
21
79
10
84
46
3
19
30
1.67
981--1007
14
1.9
14
100
0
54
44
0
22
33
1.53
966--1049
36
2.3
36
89
0
132
46
3
20
29
1.67
1104--1154
16
3.3
16
83
10
70
41
1
25
31
1.67
1114--1176
22
3.0
22
79
4
67
41
1
23
33
1.64
1171--1226
21
2.6
21
88
5
76
46
5
17
30
1.71
1205--1336
58
2.3
59
82
4
151
41
12
24
21
1.87
1321--1525
8
25.1
8
67
15
100
47
2
23
26
1.66
1322--1526
24
8.7
24
72
13
140
47
3
22
26
1.67
1346--1462
45
2.6
45
85
5
139
49
2
21
26
1.62
2461--2486
12
2.2
12
100
0
52
15
23
0
61
1.33
3171--3238
35
2.0
34
94
2
118
38
13
8
39
1.75
3554--3582
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!