Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010446.1 Corchorus capsularis cultivar CVL-1 contig10467, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18346

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
956--981
2
13.0
2
100
0
52
50
0
0
50
1.00
1845--2004
22
7.3
22
76
10
148
31
9
19
39
1.83
1846--2004
44
3.6
43
84
5
185
32
9
19
38
1.84
2040--2523
22
21.7
22
69
12
139
39
9
16
34
1.81
2265--2896
44
14.4
44
68
14
238
39
9
15
35
1.79
2309--2546
88
2.7
86
88
3
327
41
10
14
34
1.80
2309--2524
22
9.8
22
75
1
191
41
10
14
33
1.80
2226--2545
22
14.5
22
71
8
148
41
10
14
34
1.79
2670--3048
22
17.4
22
71
14
177
37
10
15
36
1.82
3276--3308
2
16.5
2
100
0
66
51
0
0
48
1.00
6053--6328
106
2.6
107
95
0
500
29
26
15
28
1.96
7886--7918
11
3.0
11
91
8
50
54
3
0
42
1.15
9711--9763
23
2.2
25
87
9
76
41
20
1
35
1.64

Tables:   1

The End!