Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010454.1 Corchorus capsularis cultivar CVL-1 contig10475, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10750

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4478--4912
167
2.6
165
85
4
563
40
14
15
29
1.87
5022--5069
26
1.9
25
84
16
64
45
0
0
54
0.99
5625--5661
13
3.0
13
88
7
51
32
2
0
64
1.07
7195--7664
156
3.0
156
99
0
915
27
16
13
42
1.86
7618--7673
27
2.1
27
100
0
112
21
17
19
41
1.91
7665--7708
23
1.9
23
95
0
79
38
2
34
25
1.68
8051--8162
55
2.0
55
98
0
215
43
7
15
33
1.74
10466--10508
21
2.0
21
86
0
59
11
32
13
41
1.81

Tables:   1

The End!